Modeling:Exp
From QuB
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Please explain what is Exp?
Properties
| Data channel index | which A/D channel contains the data, typically 0 |
|---|---|
| Update params | print dramatically less info to the Report window |
| Quiet output | print dramatically less info to the Report window |
| Data source | |
| Ligand, Voltage, ... | experimental conditions as needed by the model A variable can have a "Value" or take its changing value from an A/D channel. The "Conditioning" value is used to calculate conditioning equilibrium probability. |
| Add/Delete/Presets | (ignore these) add/delete experimental variables, and load/save all variables |
| Use | (column when Data source is File list) whether each file will be part of the file list |
| Pre-process data | none: use raw data as displayed: use the same baseline correction and filtering as the Data display as such: apply the specified filter and baseline |
| LL conv | stop if LL increases by less than this much |
| Grad conv | stop if all gradients are less than this much |
| Max iter | at most how many times to repeat (calculate LL and gradient, modify parameters) |
| Max step | how much to change parameters each iteration. 1.0 is the natural step size; smaller numbers may be more reliable for sensitive models, but will converge more slowly. |
| Restart once | if it stops after Max iterations, restart it (works better than increasing Max iterations) |
| Run mode | optimize (maximize LL) or check (compute LL with current parameters) |
| Exp | |
| Leak+Cap | |
| Sine | |
| Fit data | |
| Skip (ms) | |
| Show fitting curve | Avg: Res: |
| Batch (segments) | Together: Runs MIP with all the data at once, summing LL and generating one final model In groups of: In groups of: |
| Max batch | |
| Identical segs | |
| MUX files | |
| Propagate pars | |
| Presets |
Results
Sshown in the Report window. (explain please)
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